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MetNet - Plant pathway database

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You are in: gene > AT3G21230 / 4-coumarate:CoA ligase 5
The name of this entity may also refer to: AT3G21230 / 4-coumarate:CoA ligase 5 [polypeptide] AT3G21230 / 4-coumarate:CoA ligase 5 [RNA]

General info Literature Cellular context
TAIR information [AT3G21230]
Affy25k probenames:258037_at  
Affy8k probenames: <no data>
AFGC IDs: <no data>
Gene names: 4-coumarate:CoA ligase 5  
Description: "4-coumarate:CoA ligase 5 (4CL5); CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 86695 Blast hits to 79061 proteins in 3832 species: Archae - 1152; Bacteria - 55057; Metazoa - 3672; Fungi - 4648; Plants - 2823; Viruses - 1; Other Eukaryotes - 19342 (source: NCBI BLink)."  
Gene ontology:
FGO:0003824catalytic activity
  GO:00162074-coumarate-CoA ligase activity
PGO:0009699phenylpropanoid biosynthetic process
  GO:0009805coumarin biosynthetic process
  GO:0009963positive regulation of flavonoid biosynthetic process
  GO:0009611response to wounding
  GO:0008152metabolic process
  GO:0052542defense response by callose deposition
CGO:0005575cellular_component
NCBI links
Send this gene to ATGeneSearch for more information
Entity information

This entity is present in: endoplasmic reticulum nucleus
Synonyms were found. This entity is also known as: 4-COUMARATE COA LIGASE, 4-COUMARATE-COA LIGASE, 4-coumarate:CoA ligase, 4CL, 4CL4
PubMed references are attached to this entity: [PubMed: 53-56]
putative 4-coumarate CoA ligase 2 [aracyc]
putative 4-coumarate:CoA ligase 2; almost identical (1 amino acid difference) to GB:AAD47192 from (Arabidopsis thaliana); supported by cDNA: gi_5702187_gb_AF106086.1_AF106086 [eve]
Pathways
The entity [AT3G21230 / 4-coumarate:CoA ligase 5] participates in the following pathways:

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Pathway [10 shown] Organism Created on
4-hydroxybenzoate biosynthesis I (animals) Arabidopsis Mon Jul 29, 2013
4-hydroxybenzoate biosynthesis V Arabidopsis Mon Jul 29, 2013
Flavonoid (WYJ) Arabidopsis Fri Oct 22, 2004
flavonoid biosynthesis Arabidopsis Mon Jul 29, 2013
phaselate biosynthesis Arabidopsis Mon Jul 29, 2013
phenylalanine degradation III Arabidopsis Mon Jul 29, 2013
phenylethanol biosynthesis Arabidopsis Mon Jul 29, 2013
phenylpropanoid biosynthesis Arabidopsis Mon Jul 29, 2013
simple coumarins biosynthesis Arabidopsis Mon Jul 29, 2013
suberin biosynthesis Arabidopsis Mon Jul 29, 2013

Interactions
Browse interactions [1]: By type By location All interactions
Type
Transcription

Copyright © 2006-2016 Wurtele lab. Copyright refers to the integration and online application, not the data from the various sources.

 

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