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MetNet - Plant pathway database

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You are in: gene > AT1G23820 / spermidine synthase 1
The name of this entity may also refer to: AT1G23820 / spermidine synthase 1 [polypeptide] AT1G23820 / spermidine synthase 1 [RNA]

General info Literature Cellular context
TAIR information [AT1G23820]
Affy25k probenames:265172_at  
Affy8k probenames: 12811_at   14651_at  
AFGC IDs: 89I6T7 (T20920)  
Gene names: spermidine synthase 1   spermidine synthase 1  
Description: spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5258 Blast hits to 5255 proteins in 1502 species: Archae - 169; Bacteria - 2896; Metazoa - 353; Fungi - 199; Plants - 416; Viruses - 0; Other Eukaryotes - 1225 (source: NCBI BLink).   spermidine synthase 1 (SPDS1); FUNCTIONS IN: spermidine synthase activity; INVOLVED IN: spermidine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: spermidine synthase 2 (TAIR:AT1G70310.1); Has 5225 Blast hits to 5225 proteins in 1497 species: Archae - 169; Bacteria - 2879; Metazoa - 350; Fungi - 195; Plants - 413; Viruses - 0; Other Eukaryotes - 1219 (source: NCBI BLink).  
Gene ontology:
FGO:0003824catalytic activity
  GO:0004766spermidine synthase activity
  GO:0005515protein binding
PGO:0008295spermidine biosynthetic process
CGO:0005829cytosol
  GO:0009507chloroplast
NCBI links
Send this gene to ATGeneSearch for more information
Entity information

This entity is present in: nucleus
Synonyms were found. This entity is also known as: SPDS1, SPERMIDINE SYNTHASE, SPERMIDINE SYNTHASE 1
Pathways
The entity [AT1G23820 / spermidine synthase 1] participates in the following pathways:

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Pathway [3 shown] Organism Created on
spermidine biosynthesis I Arabidopsis Mon Jul 29, 2013
superpathway of polyamine biosynthesis Arabidopsis Mon Jul 29, 2013
superpathway of polyamine biosynthesis II Arabidopsis Mon Jul 29, 2013

Interactions
Browse interactions [1]: By type By location All interactions
Type
Transcription

Copyright © 2006-2016 Wurtele lab. Copyright refers to the integration and online application, not the data from the various sources.

 

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